NIF is prominently featured in Neuroinformatics [ISSN: 1539-2791 (Print) 1559-0089 (Online)], published by Humana Press, Inc., in Volume 6, Number 3 / September, 2008 edition. Visit the SpringerLink interactive database Editorial View.

Journal Articles

1. Bug WJ, Ascoli GA, Grethe JS, Gupta A, Fennema-Notestine C, Laird AR, Larson SD, Rubin D, Shepherd GM, Turner JA, Martone ME. The NIFSTD and BIRNLex Vocabularies: Building Comprehensive Ontologies for Neuroscience. Neuroinformatics. 2008 Sep;6(3):175-94. Epub 2008 Oct 31. PMID: 18975148; PMCID: PMC2743139 [PDF]
2. Buccigrossi R, Ellisman M, Grethe J, Haselgrove C, Kennedy DN, Martone M, Preuss N, Reynolds K, Sullivan M, Turner J, Wagner K. The neuroimaging informatics tools and resources clearinghouse (NITRC). AMIA Annu Symp Proc. 2008 Nov 6:1000.
3. Cheung KH, Lim E, Samwald M, Chen H, Marenco L, Holford ME, Morse TM, Mutalik P, Shepherd GM, Miller PL. Approaches to Neuroscience Data Integration. Brief Bioinform. 2009 Jul;10(4):345-53. PMID: 19505888; PMCID: PMC2691938 [PDF]
4. Gardner D, Akil H, Ascoli GA, Bowden DM, Bug W, Donohue DE, Goldberg DH, Grafstein B, Grethe JS, Gupta A, Halavi M, Kennedy DN, Marenco L, Martone ME, Miller PL, Müller HM, Robert A, Shepherd GM, Sternberg PW, Van Essen DC, Williams RW. The Neuroscience Information Framework: A Data and Knowledge Environment for Neuroscience. Neuroinformatics. 2008 Sep;6(3):149-60. Epub 2008 Oct 23. PMID: 18946742; PMCID: PMC2661130 [PDF]
5. Gardner D, Goldberg DH, Grafstein B, Robert A, Gardner EP. Terminology for Neuroscience Data Discovery: Multi-tree Syntax and Investigator-Derived Semantics. Neuroinformatics. 2008 Sep;6(3):161-74. Epub 2008 Oct 29. PMID: 18958630; PMCID: PMC2663521 [PDF]
6. Gupta A, Bug W, Marenco L, Qian X, Condit C, Rangarajan A, Müller HM, Miller PL, Sanders B, Grethe JS, Astakhov V, Shepherd G, Sternberg PW, Martone ME. Federated Access to Heterogeneous Information Resources in the Neuroscience Information Framework (NIF). Neuroinformatics. 2008 Sep;6(3):205-17. Epub 2008 Oct 29. PMID: 18958629; PMCID: PMC2689790 [PDF]
7. Halavi M, Polavaram S, Donohue DE, Hamilton G, Hoyt J, Smith KP, Ascoli GA. NeuroMorpho.Org Implementation of Digital Neuroscience: Dense Coverage and Integration with the NIF. Neuroinformatics. 2008 Sep;6(3):241-52. Epub 2008 Oct 24. PMID: 18949582; PMCID: PMC2655120 [PDF]
8. Marenco L, Ascoli GA, Martone ME, Shepherd GM, Miller PL. The NIF LinkOut Broker: A Web Resource to Facilitate Federated Data Integration using NCBI Identifiers. Neuroinformatics. 2008 Sep;6(3):219-27. Epub 2008 Oct 31. PMID: 18975149; PMCID: PMC2704600 [PDF]
9. Marenco L, Li Y, Martone ME, Sternberg PW, Shepherd GM, Miller PL. Issues in the Design of a Pilot Concept-Based Query Interface for the Neuroinformatics Information Framework. Neuroinformatics. 2008 Sep;6(3):229-39. Epub 2008 Oct 25. PMID: 18953674; PMCID: PMC2664632 [PDF]
10. Marenco L, Wang R, Shepherd GM, Miller PL. The NIF DISCO Framework: Facilitating Automated Integration of Neuroscience Content on the Web. Neuroinformatics. 2010 Jun;8(2):101-12. [PDF]
11. Müller HM, Rangarajan A, Teal TK, Sternberg PW. Textpresso for Neuroscience: Searching the Full Text of Thousands of Neuroscience Research Papers. Neuroinformatics. 2008 Sep;6(3):195-204. Epub 2008 Oct 24. PMID: 18949581; PMCID: PMC2666735 [PDF]
12. Ruttenberg A, Clark T, Bug W, Samwald M, Bodenreider O, Chen H, Doherty D, Forsberg K, Gao Y, Kashyap V, Kinoshita J, Luciano J, Marshall MS, Ogbuji C, Rees J, Stephens S, Wong GT, Wu E, Zaccagnini D, Hongsermeier T, Neumann E, Herman I, Cheung KH. Advancing translational research with the Semantic Web. BMC Bioinformatics. 2007 May 9;8 Suppl 3:S2. PMCID: PMC1892099 [PDF]
13. Van Essen DV. Lost in Localization--but Found with Foci?!. Neuroimage. 2009 Oct 15;48(1):14-7. Epub 2009 May 27. PMID: 19481158 [PDF]
14. Young L, Vismer D, McAuliffe MJ, Tu SW, Tennakoon L, Das AK, Astakhov V, Gupta A, Grethe JS and ME Martone. Ontology Driven Data Integration for Autism Research, IEEE International Symposium on Computer-Based Medical Systems. 2009.

Conference Presentations

1. Bug WJ, Ascoli GA, Grethe JS, Gupta A, Lamont S, Larson S, Shepherd GM, Martone ME. The NIFSTD Vocabulary: Empowering Concept-driven Queries Against Diverse, Online Neuroscience Resources. Society for Neuroscience; Washington, D.C.; 15-19 Nov 2008.
2. Gupta A, Bug W, Qian X, Condit C, Grethe JS, Astakhov V, Sanders B, Marenco L, Miller PL, Shepherd GM, Rangarajan A, Mueller HM, Sternberg PW, Lamont S, Larson S, Ascoli G, Polavaram S, Martone ME. Finding Neuroscience Information from Heterogeneous Information Sources with NIF (Neuroscience Information Framework). Society for Neuroscience; Washington, D.C.; 15-19 Nov 2008.
3. Martone ME, Gupta A, Bug WJ, Xufei, Condit C, Marenco L, Miller PL. The Neuroscience Information Framework (NIF): Accessing Diverse Neuroscience Resources Through a Single Interface. 1st INCF Congress of Neuroinformatics: Databasing and Modeling the Brain; Stockholm, Sweden; 7-9 Sep 2008.
4. Polavaram S, Halavi M, Donohue DE, Ascoli GA. NeuroMorpho.org Implementation of Digital Neuroanatomy: Public Distribution of 3D Reconstructions and Deep Registration with the Neuroscience Information Framework. Society for Neuroscience; Washington, D.C.; 15-19 Nov 2008.